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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5995107 chr22:35892800 A/G C22orf32 chr22:42475699-42480287:+ -0.42 -6.31 6.33E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G DRG1 chr22:31795509-31926620:+ -0.48 -6.32 6.1E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G EIF3D chr22:36906897-36925483:- -0.46 -6.53 1.69E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G FAM10A4 chr13:50746154-50747749:+ -0.45 -6.08 2.43E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G GGA1 chr22:38004482-38029571:+ -0.47 -6.35 5.03E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G GTPBP1 chr22:39101728-39134304:+ -0.45 -6.08 2.48E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G HPS4 chr22:26839389-26879803:- -0.56 -7.08 5.15E-12 Box Plot
THCA rs5995107 chr22:35892800 A/G HSCB chr22:29138019-29153503:+ -0.48 -7.02 7.5E-12 Box Plot
THCA rs5995107 chr22:35892800 A/G KLHL22 chr22:20795806-20850170:- -0.46 -5.92 6.23E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G MAPK1 chr22:22108789-22221970:- -0.36 -6.04 3.14E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G MCAT chr22:43528212-43539400:- -0.38 -6.01 3.7E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G MTMR3 chr22:30279144-30426855:+ -0.43 -5.88 7.8E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G NCAPH2 chr22:50946645-50961901:+ -0.49 -6.67 7.24E-11 Box Plot
THCA rs5995107 chr22:35892800 A/G NHP2L1 chr22:42069934-42086508:- -0.5 -6.67 7.04E-11 Box Plot
THCA rs5995107 chr22:35892800 A/G NOL12 chr22:38077680-38089485:+ -0.39 -6.61 1.02E-10 Box Plot